STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lama1Laminin subunit alpha 1. (2434 aa)    
Predicted Functional Partners:
lamb1
Laminin subunit beta-1 isoform X1.
    
0.667
lamb2
Laminin subunit beta-2 isoform X1.
    
0.667
LOC104929904
Laminin subunit beta-1 isoform X1.
    
0.557
LOC104931248
Laminin subunit beta-2.
    
0.557
lamc3
Laminin subunit gamma-3.
    
0.539
LOC104937404
Laminin subunit gamma-2.
    
0.539
lamc1
Laminin subunit gamma-1.
    
0.539
lamb3
Laminin subunit beta 3.
    
0.487
hspg2
Heparan sulfate proteoglycan 2.
   
0.456
birc6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 
  0.453
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.