STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrn3RNA polymerase I-specific transcription initiation factor RRN3. (647 aa)    
Predicted Functional Partners:
twistnb
DNA-directed RNA polymerase I subunit RPA43.
   
 0.999
polr1b
DNA-directed RNA polymerase I subunit RPA2.
   
 0.998
polr1a
DNA-directed RNA polymerase I subunit RPA1.
   
 0.998
polr1c
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.995
polr1e
DNA-directed RNA polymerase I subunit RPA49.
   
 0.993
znrd1
DNA-directed RNA polymerase I subunit RPA12.
   
 0.984
LOC104920592
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.980
polr2k
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.973
cd3eap
DNA-directed RNA polymerase I subunit RPA34.
   
 0.973
polr3a
DNA-directed RNA polymerase III subunit RPC1.
   
 0.969
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.