STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shcbp1SHC SH2 domain-binding protein 1. (691 aa)    
Predicted Functional Partners:
LOC104918068
Baculoviral IAP repeat-containing protein 5.2.
   
  
 0.857
racgap1
Rac GTPase-activating protein 1.
   
 
 0.845
LOC104927930
Rac GTPase-activating protein 1.
   
 
 0.845
ncapg
Condensin complex subunit 3 isoform X1.
   
  
 0.839
ncapg2
Condensin-2 complex subunit G2 isoform X1.
   
  
 0.839
LOC104922333
Kinesin-like protein KIF23 isoform X1.
   
 
 0.837
KIF23
Kinesin-like protein KIF23 isoform X1.
   
 
 0.837
kif11
Kinesin-like protein KIF11 isoform X1.
   
  
 0.833
pbk
Lymphokine-activated killer T-cell-originated protein kinase.
   
  
 0.829
cdca8
Borealin.
   
  
 0.810
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.