Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLCRP00005003634 | LOC104923045 | ENSLCRP00005003634 | ENSLCRP00005005623 | annotation not available | H-2 class II histocompatibility antigen, A-U alpha chain. | 0.618 |
ENSLCRP00005003634 | LOC104923075 | ENSLCRP00005003634 | ENSLCRP00005005697 | annotation not available | RLA class II histocompatibility antigen, DP alpha-1 chain-like. | 0.908 |
ENSLCRP00005003634 | cd74 | ENSLCRP00005003634 | ENSLCRP00005017999 | annotation not available | HLA class II histocompatibility antigen gamma chain. | 0.768 |
ENSLCRP00005003634 | rps14 | ENSLCRP00005003634 | ENSLCRP00005048951 | annotation not available | Small subunit ribosomal protein S14e. | 0.768 |
ENSLCRP00005005641 | LOC104923045 | ENSLCRP00005005641 | ENSLCRP00005005623 | Class II histocompatibility antigen, B-L beta chain. | H-2 class II histocompatibility antigen, A-U alpha chain. | 0.618 |
ENSLCRP00005005641 | LOC104923075 | ENSLCRP00005005641 | ENSLCRP00005005697 | Class II histocompatibility antigen, B-L beta chain. | RLA class II histocompatibility antigen, DP alpha-1 chain-like. | 0.908 |
ENSLCRP00005005641 | cd74 | ENSLCRP00005005641 | ENSLCRP00005017999 | Class II histocompatibility antigen, B-L beta chain. | HLA class II histocompatibility antigen gamma chain. | 0.975 |
ENSLCRP00005005641 | rps14 | ENSLCRP00005005641 | ENSLCRP00005048951 | Class II histocompatibility antigen, B-L beta chain. | Small subunit ribosomal protein S14e. | 0.768 |
ENSLCRP00005006072 | LOC104923045 | ENSLCRP00005006072 | ENSLCRP00005005623 | annotation not available | H-2 class II histocompatibility antigen, A-U alpha chain. | 0.618 |
ENSLCRP00005006072 | LOC104923075 | ENSLCRP00005006072 | ENSLCRP00005005697 | annotation not available | RLA class II histocompatibility antigen, DP alpha-1 chain-like. | 0.908 |
ENSLCRP00005006072 | cd74 | ENSLCRP00005006072 | ENSLCRP00005017999 | annotation not available | HLA class II histocompatibility antigen gamma chain. | 0.768 |
ENSLCRP00005006072 | rps14 | ENSLCRP00005006072 | ENSLCRP00005048951 | annotation not available | Small subunit ribosomal protein S14e. | 0.768 |
ENSLCRP00005029672 | LOC104923045 | ENSLCRP00005029672 | ENSLCRP00005005623 | annotation not available | H-2 class II histocompatibility antigen, A-U alpha chain. | 0.636 |
ENSLCRP00005029672 | LOC104923075 | ENSLCRP00005029672 | ENSLCRP00005005697 | annotation not available | RLA class II histocompatibility antigen, DP alpha-1 chain-like. | 0.842 |
LOC104923044 | LOC104923045 | ENSLCRP00005005710 | ENSLCRP00005005623 | DLA class II histocompatibility antigen, DR-1 beta chain-like. | H-2 class II histocompatibility antigen, A-U alpha chain. | 0.665 |
LOC104923044 | LOC104923075 | ENSLCRP00005005710 | ENSLCRP00005005697 | DLA class II histocompatibility antigen, DR-1 beta chain-like. | RLA class II histocompatibility antigen, DP alpha-1 chain-like. | 0.935 |
LOC104923044 | cd74 | ENSLCRP00005005710 | ENSLCRP00005017999 | DLA class II histocompatibility antigen, DR-1 beta chain-like. | HLA class II histocompatibility antigen gamma chain. | 0.975 |
LOC104923044 | rps14 | ENSLCRP00005005710 | ENSLCRP00005048951 | DLA class II histocompatibility antigen, DR-1 beta chain-like. | Small subunit ribosomal protein S14e. | 0.768 |
LOC104923045 | ENSLCRP00005003634 | ENSLCRP00005005623 | ENSLCRP00005003634 | H-2 class II histocompatibility antigen, A-U alpha chain. | annotation not available | 0.618 |
LOC104923045 | ENSLCRP00005005641 | ENSLCRP00005005623 | ENSLCRP00005005641 | H-2 class II histocompatibility antigen, A-U alpha chain. | Class II histocompatibility antigen, B-L beta chain. | 0.618 |
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