STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB1Leukocyte elastase inhibitor isoform X1. (436 aa)    
Predicted Functional Partners:
f2
Coagulation factor II (thrombin).
   
 0.793
arpc2
Actin related protein 2/3 complex, subunit 2.
 
      0.549
LOC104938449
Fibrinogen alpha chain.
   
 0.543
vtn
Vitronectin isoform X1.
   
 0.526
LOC104934406
Vitronectin.
   
 0.526
plg
Plasminogen.
   
 0.509
fgb
Fibrinogen beta chain precursor.
   
 0.494
fgg
Fibrinogen gamma chain.
   
 0.492
serpind1
Heparin cofactor II.
  
 
 
0.455
LOC104923938
Cathepsin K.
    
 0.433
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.