STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI2Troponin I, fast skeletal muscle. (194 aa)    
Predicted Functional Partners:
LOC104929226
Troponin C, skeletal muscle isoform X1.
   
 0.982
LOC104929822
Myosin light chain 1, skeletal muscle isoform.
   
 0.828
LOC104924476
Troponin T, fast skeletal muscle isoforms-like isoform X1.
 
 
 0.793
LOC104930624
Troponin T, fast skeletal muscle isoforms-like isoform X4.
 
 
 0.793
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.785
LOC104939192
Troponin C, slow skeletal and cardiac muscles-like.
   
 0.785
ENSLCRP00005058052
annotation not available
   
 0.785
LOC104939292
Troponin T, slow skeletal muscle isoform X1.
 
 0.782
LOC104940695
Troponin T, cardiac muscle isoforms-like.
 
 0.780
ENSLCRP00005057237
Troponin T, slow skeletal muscle-like isoform X1.
 
 0.771
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.