STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113747427Macrophage mannose receptor 1-like. (370 aa)    
Predicted Functional Partners:
leng8
Leukocyte receptor cluster member 8 isoform X1.
      
 0.520
heca
Headcase protein homolog isoform X1.
      
 0.519
cpb1
Carboxypeptidase B.
      
 0.515
LOC104936438
Apolipoprotein D and lipocalin family protein.
      
 0.513
LOC104926179
Apolipoprotein D and lipocalin family protein.
      
 0.513
LOC104926178
Apolipoprotein D and lipocalin family protein.
      
 0.513
LOC104926176
Apolipoprotein D and lipocalin family protein.
      
 0.513
ankrd2
Ankyrin repeat domain-containing protein 2.
    
 0.450
VMP1
Vacuole membrane protein 1 isoform X1.
      
 0.443
vmp1
Vacuole membrane protein 1.
      
 0.443
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.