STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005006207annotation not available (474 aa)    
Predicted Functional Partners:
fancm
Fanconi anemia group M protein isoform X1.
    
 0.907
med14
Mediator of RNA polymerase II transcription subunit 14 isoform X1.
    
 0.647
med12
Mediator of RNA polymerase II transcription subunit 12 isoform X1.
    
 0.612
ino80d
INO80 complex subunit D.
    
 0.612
wdr73
WD repeat-containing protein 73 isoform X1.
    
 0.606
RBBP4
Histone-binding protein RBBP4.
    
 0.606
ENSLCRP00005054289
annotation not available
    
 0.606
LOC104932139
Histone-binding protein RBBP4.
    
 0.606
ENSLCRP00005057799
annotation not available
    
 0.606
rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.590
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.