STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104926997poly(ADP-ribose) glycohydrolase. (741 aa)    
Predicted Functional Partners:
parp1
Poly [ADP-ribose] polymerase 1.
    
 0.815
parp2
Poly [ADP-ribose] polymerase 2/3/4.
    
 0.801
parp3
Poly [ADP-ribose] polymerase 2/3/4.
    
 0.753
vwa5b2
Von Willebrand factor A domain containing 5B2.
    
 0.673
parp4
Poly [ADP-ribose] polymerase 4 isoform X2.
    
 0.673
pcna
Proliferating cell nuclear antigen.
    
   0.530
ENSLCRP00005050102
annotation not available
    
   0.530
polb
DNA polymerase beta.
     
 0.503
LOC104920901
Probable flap endonuclease 1 homolog.
     
 0.482
fen1
Flap endonuclease 1.
     
 0.482
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.