STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104928493Endoplasmic reticulum aminopeptidase 1 isoform X1. (956 aa)    
Predicted Functional Partners:
agt
Angiotensinogen.
  
 0.562
LOC104933397
H-2 class I histocompatibility antigen, Q9 alpha chain.
    
 0.498
LOC104933327
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
  
  
 0.432
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
  
  
 0.432
LOC104938517
Uncharacterized protein LOC104938517 precursor.
   
 
 0.427
ENSLCRP00005013604
Beta-2-microglobulin-like.
   
 
 0.427
LOC104924892
Replication protein A 32 kDa subunit-like isoform X1.
   
 
 0.427
rpa2
Replication protein A 32 kDa subunit.
   
 
 0.427
tbc1d1
TBC1 domain family member 1.
     
 0.414
tbc1d4
TBC1 domain family member 4.
     
 0.414
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.