STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk19Cyclin-dependent kinase 19 isoform X1. (493 aa)    
Predicted Functional Partners:
ccnc
Failed axon connections homolog.
   
 0.975
med14
Mediator of RNA polymerase II transcription subunit 14 isoform X1.
    
 0.972
med17
Mediator of RNA polymerase II transcription subunit 17.
    
 0.972
med7
Mediator of RNA polymerase II transcription subunit 7.
    
 0.957
med12
Mediator of RNA polymerase II transcription subunit 12 isoform X1.
    
 0.954
med31
Mediator of RNA polymerase II transcription subunit 31.
    
 0.950
med1
Mediator of RNA polymerase II transcription subunit 1.
    
 0.941
Med6
Mediator of RNA polymerase II transcription subunit 6.
    
 0.936
med23
Mediator of RNA polymerase II transcription subunit 23 isoform X1.
    
 0.926
polr2a
DNA-directed RNA polymerase II subunit RPB1.
    
 
 0.919
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.