STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104930217RUN domain-containing protein 3A. (484 aa)    
Predicted Functional Partners:
ap2s1
AP-2 complex subunit sigma-1.
    
   0.497
TMEM19
Transmembrane protein 19.
      
 0.487
uvrag
UV radiation resistance-associated gene protein.
    
 
 0.481
tmem145
Transmembrane protein 145.
   
  
 0.437
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X1.
    
 
 0.416
becn1
Beclin-1.
    
 
 0.403
dcakd
Dephospho-CoA kinase domain-containing protein.
      
 0.403
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.