STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104938474Dehydrogenase/reductase SDR family member 13. (323 aa)    
Predicted Functional Partners:
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial isoform X1.
  
 0.513
fdx2
Ferredoxin-2, mitochondrial.
   
 0.464
FDX1
Ferredoxin-1, mitochondrial.
   
 0.464
mcat
Malonyl-CoA-acyl carrier protein transacylase, mitochondrial.
  
 
 0.443
cd3e
T-cell surface glycoprotein CD3 epsilon chain.
   
 0.437
sord
L-iditol 2-dehydrogenase.
  
 
 0.431
coq3
Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase.
   
 0.424
aasdh
Beta-alanine-activating enzyme isoform X1.
  
 0.424
h6pd
GDH/6PGL endoplasmic bifunctional protein.
  
 0.404
LOC104936331
Cholesterol 7-desaturase.
  
 
 0.401
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.