STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104929429Guanine nucleotide exchange factor DBS. (1080 aa)    
Predicted Functional Partners:
LOC104923623
Cell division control protein 42 homolog.
    
 0.647
CDC42
Cell division control protein 42 homolog.
    
 0.647
LOC104932543
Cell division control protein 42 homolog.
    
 0.540
LOC104935006
Cell division control protein 42 homolog.
    
 0.540
LOC104918363
Rho-related GTP-binding protein RhoA-D.
    
 0.536
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.536
LOC104933314
Ras homolog gene family, member A.
    
 0.536
LOC104932082
Ras homolog gene family, member A.
    
 0.536
LOC104933039
Rho-related GTP-binding protein RhoA-C.
    
 0.536
LOC104918352
Rho-related GTP-binding protein RhoA-B.
    
 0.536
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.