STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104938400ADP-ribosylation factor 3. (181 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2.
    
 0.824
LOC104920145
Intersectin-2.
    
 0.824
copg2
Coatomer subunit gamma-2.
    
 0.734
gbf1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1.
    
 0.732
itsn1
Intersectin 1.
    
 0.725
ap1g1
AP-1 complex subunit gamma-1 isoform X1.
    
 0.713
ENSLCRP00005029456
annotation not available
   
 0.704
gak
Cyclin-G-associated kinase isoform X1.
    
 0.694
arfgap1
ADP-ribosylation factor GTPase-activating protein 1 isoform X2.
   
 0.674
LOC104931180
AP-1 complex subunit gamma-1.
    
 0.663
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.