STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc8b1Solute carrier family 24 (sodium/potassium/calcium exchanger), member 6. (583 aa)    
Predicted Functional Partners:
oca2
P protein.
  
  
 0.622
Glrx3
Glutaredoxin-3.
   
  
 0.580
micu1
Calcium uptake protein 1, mitochondrial isoform X1.
      
 0.573
LOC104928235
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
      
 0.543
utp15
UTP15 small subunit processome component.
      
 0.504
tpcn2
Two pore calcium channel protein 2 isoform X1.
      
 0.489
LOC104936664
LOW QUALITY PROTEIN: two pore calcium channel protein 1.
      
 0.471
tpcn1
Two pore calcium channel protein 1 isoform X2.
      
 0.471
slc9a7
Solute carrier family 9 member A7.
   
 
 0.471
slc9a6
Solute carrier family 9 (sodium/hydrogen exchanger), member 6/7.
   
 
 0.471
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.