STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cops4COP9 signalosome complex subunit 4. (442 aa)    
Predicted Functional Partners:
cops2
COP9 signalosome complex subunit 2 isoform X1.
   
 0.999
COPS6
COP9 signalosome complex subunit 6.
   
 0.999
cops8
COP9 signalosome complex subunit 8.
   
 0.999
gps1
COP9 signalosome complex subunit 1 isoform X2.
   
 0.999
cops7a
COP9 signalosome complex subunit 7a.
   
 0.999
cops3
COP9 signalosome complex subunit 3 isoform X1.
   
 0.999
cops5
COP9 signalosome complex subunit 5.
   
 0.999
ppp1r42
Protein phosphatase 1 regulatory subunit 42.
   
 0.982
rbx1
E3 ubiquitin-protein ligase RBX1.
   
 0.978
cul2
Cullin 2.
   
 0.933
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.