STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104923533Multidrug resistance protein, MATE family. (555 aa)    
Predicted Functional Partners:
hsd17b10
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
    
 0.709
fdft1
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.583
trmt10b
TRNA (guanine9-N1)-methyltransferase.
   
 0.507
trmt10a
TRNA (guanine9-N1)-methyltransferase.
   
 0.507
trmt10c
Mitochondrial ribonuclease P protein 1.
   
 0.507
ndufaf6
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1.
   
 
 0.491
wdr97
WD repeat-containing protein 97 isoform X1.
   
 
 0.491
pdcd11
Protein RRP5 homolog isoform X1.
  
    0.461
LOC104928098
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
  
  
 0.455
gapdh
Glyceraldehyde 3-phosphate dehydrogenase.
  
  
 0.455
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.