STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104933283Transcriptional enhancer factor TEF-5-like. (431 aa)    
Predicted Functional Partners:
yap1
Transcriptional coactivator YAP1.
   
 0.911
vgll2
Transcription cofactor vestigial-like protein 2 isoform X1.
    
 
 0.764
LOC104940214
Transcription cofactor vestigial-like protein 4.
    
 
 0.645
vgll4
Transcription cofactor vestigial-like protein 4 isoform X1.
    
 
 0.645
LOC104937060
Transcription cofactor vestigial-like protein 4.
    
 
 0.578
insm1
Insulinoma-associated protein 1.
    
 
 0.483
LOC104919302
Insulinoma-associated protein 1b.
    
 
 0.483
INSM2
INSM transcriptional repressor 2.
    
 
 0.483
LOC104929832
E3 ubiquitin-protein ligase HECW2 isoform X1.
    
 0.451
LOC104937323
E3 ubiquitin-protein ligase HECW2.
    
 0.451
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.