STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104921916Cytochrome P450 family 1 subfamily B polypeptide 1. (536 aa)    
Predicted Functional Partners:
LOC104931154
Indoleamine 2,3-dioxygenase 2.
   
 
 0.952
LOC104929405
Indoleamine 2,3-dioxygenase 2 isoform X1.
   
 
 0.952
LOC104926350
UDP-glucuronosyltransferase-like isoform X1.
   
 0.949
comt
Catechol O-methyltransferase.
   
 
 0.930
hsd17b8
Estradiol 17-beta-dehydrogenase 8.
   
 
 0.929
LOC104920743
Cytochrome P450 family 1 subfamily A polypeptide 1.
  
 
0.929
hsd17b1
17beta-estradiol 17-dehydrogenase.
   
 
 0.920
hsd17b12
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.
  
 0.920
LOC104925842
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.
  
 0.920
ephx1
Microsomal epoxide hydrolase.
  
 0.919
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.