STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polr1bDNA-directed RNA polymerase I subunit RPA2. (1132 aa)    
Predicted Functional Partners:
polr2f
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
 0.999
znrd1
DNA-directed RNA polymerase I subunit RPA12.
   
 0.999
polr2k
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.999
polr2l
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.999
polr1c
DNA-directed RNA polymerases I and III subunit RPAC1.
  
 0.999
polr1a
DNA-directed RNA polymerase I subunit RPA1.
  
 0.999
twistnb
DNA-directed RNA polymerase I subunit RPA43.
   
 0.999
polr1e
DNA-directed RNA polymerase I subunit RPA49.
   
 0.999
polr2h
RNA polymerase II subunit H.
   
 0.999
rrn3
RNA polymerase I-specific transcription initiation factor RRN3.
   
 0.998
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.