STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dync2li1Cytoplasmic dynein 2 light intermediate chain 1. (374 aa)    
Predicted Functional Partners:
wdr60
WD repeat domain 60.
    
 0.979
wdr34
WD repeat-containing protein 34 isoform X2.
    
 0.956
tctex1d2
Tctex1 domain-containing protein 2.
   
 0.905
DYNLRB1
Dynein light chain roadblock-type 1.
    
 0.884
dynlrb2
Dynein light chain roadblock-type 2.
    
 0.884
ift88
Intraflagellar transport 88.
   
 0.845
ift52
Intraflagellar transport protein 52 homolog.
     
 0.840
ift57
Intraflagellar transport protein 57 homolog isoform X1.
     
 0.840
ift80
Intraflagellar transport protein 80 homolog.
     
 0.838
ift172
Intraflagellar transport protein 172 homolog.
     
 0.837
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.