STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbckTBC domain-containing protein kinase-like protein. (892 aa)    
Predicted Functional Partners:
cxxih12orf4
Protein C12orf4 homolog.
    
 
 0.709
ppp1r21
Protein phosphatase 1 regulatory subunit 21 isoform X1.
    
 
 0.612
LOC104920304
MOB kinase activator 1A.
      
 0.590
LOC104922434
Nucleoside diphosphate kinase 6.
   
  
 0.590
cnpy2
Protein canopy homolog 2.
      
 0.571
mob3c
MOB kinase activator 3C isoform X1.
      
 0.450
LOC104921817
MOB kinase activator 3A.
      
 0.450
LOC104918109
MOB kinase activator 2.
      
 0.449
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
      
 0.434
nol10
Ribosome biogenesis protein ENP2.
      
 0.434
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.