STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf146Uncharacterized protein C1orf146 homolog isoform X3. (172 aa)    
Predicted Functional Partners:
cxxivh15orf41
Uncharacterized protein C15orf41 homolog isoform X1.
  
 0.636
aasdh
Beta-alanine-activating enzyme isoform X1.
    
 0.618
palb2
Partner and localizer of BRCA2.
  
 0.601
ndufab1
NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein.
  
 0.601
hfm1
Helicase for meiosis 1.
      
 0.578
msh4
DNA mismatch repair protein MSH4.
  
  
 0.570
oxct1
Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial.
  
 
 0.473
msh5
MutS protein homolog 5 isoform X1.
  
  
 0.465
isoc2
Isochorismatase domain-containing protein 2 isoform X1.
  
 0.463
adsl
Adenylosuccinate lyase.
  
 
 0.461
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.