STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa1841Uncharacterized protein KIAA1841 homolog isoform X5. (729 aa)    
Predicted Functional Partners:
nicn1
Nicolin-1.
    
   0.659
ttll1
Probable tubulin polyglutamylase TTLL1.
    
   0.562
lrrc49
Leucine-rich repeat-containing protein 49 isoform X1.
    
   0.561
fcsk
Fucose kinase.
      
 0.515
ENSLCRP00005006710
annotation not available
      
 0.513
pex13
Peroxisome biogenesis factor 13.
 
    
 0.447
cog7
Conserved oligomeric Golgi complex subunit 7.
      
 0.405
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.