STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfm2Ribosome-releasing factor 2, mitochondrial. (758 aa)    
Predicted Functional Partners:
mrpl27
39S ribosomal protein L27, mitochondrial.
   
 
 0.961
mrpl20
39S ribosomal protein L20, mitochondrial.
  
 
 0.954
mrpl12
39S ribosomal protein L12, mitochondrial.
   
 
 0.943
mrpl36
39S ribosomal protein L36, mitochondrial.
   
 
 0.919
mrpl19
39S ribosomal protein L19, mitochondrial.
  
 
 0.907
mrpl3
39S ribosomal protein L3, mitochondrial.
  
 
 0.884
mrpl9
39S ribosomal protein L9, mitochondrial.
   
 
 0.883
mrpl33
39S ribosomal protein L33, mitochondrial.
   
   0.883
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
  
 
 0.876
mrpl32
39S ribosomal protein L32, mitochondrial.
   
   0.870
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.