STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpv17lMpv17-like protein. (210 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
    
 0.627
pex3
Peroxisomal biogenesis factor 3.
   
 
 0.577
pex16
Peroxisomal biogenesis factor 16.
     
 0.564
Eci2
Enoyl-CoA delta isomerase 2, mitochondrial isoform X1.
   
 
 0.547
pex10
Peroxisome biogenesis factor 10.
     
 0.538
pex13
Peroxisome biogenesis factor 13.
   
 
 0.534
pex12
Peroxisome assembly protein 12.
     
 0.507
pex11g
Peroxisomal membrane protein 11C.
   
 
 0.480
pex11a
Peroxisomal biogenesis factor 11 alpha.
   
 
 0.480
scp2
Non-specific lipid-transfer protein.
   
 
 0.464
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.