STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109137038ALK and LTK ligand 2. (162 aa)    
Predicted Functional Partners:
LOC104922171
ALK tyrosine kinase receptor.
    
 
 0.553
alk
ALK tyrosine kinase receptor isoform X1.
    
 
 0.553
chpf
Chondroitin polymerizing factor.
   
    0.431
chpf2
Chondroitin sulfate glucuronyltransferase.
   
    0.431
met
Hepatocyte growth factor receptor isoform X1.
    
 
 0.403
LOC104920504
Macrophage-stimulating protein receptor isoform X1.
    
 
 0.403
mst1r
Macrophage-stimulating protein receptor.
    
 
 0.403
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.