STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrdChordin. (951 aa)    
Predicted Functional Partners:
bmp2
Bone morphogenetic protein 2.
    
 0.983
bmp4
Bone morphogenetic protein 4.
    
 0.978
LOC104936815
Bone morphogenetic protein 4 isoform X2.
    
 0.971
LOC104939054
Bone morphogenetic protein 7 isoform X1.
    
 0.970
LOC109142805
Growth/differentiation factor 6-A.
    
 0.966
LOC104919617
Bone morphogenetic protein 7 isoform X1.
    
 0.952
bmp5
Bone morphogenetic protein 5.
    
 0.942
bmp6
Bone morphogenetic protein 6.
    
 0.942
gdf5
Growth differentiation factor 5.
    
 0.934
gdf6
Growth differentiation factor 6.
    
 0.934
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (26%) [HD]