STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plpp1Phospholipid phosphatase 1 isoform X1. (282 aa)    
Predicted Functional Partners:
mogat2
2-acylglycerol O-acyltransferase 2.
     
 0.932
bcl2
3-ketodihydrosphingosine reductase.
    
 0.929
sgpl1
Sphingosine-1-phosphate lyase 1 isoform X1.
    
 0.926
SPHK1
Sphingosine kinase 1 isoform X1.
    
 0.921
LOC104939955
Sphingosine kinase 2.
    
 0.921
selenoi
Ethanolaminephosphotransferase 1.
    
 0.921
chpt1
Diacylglycerol cholinephosphotransferase.
    
 0.921
cept1
Choline/ethanolaminephosphotransferase 1.
    
 0.921
frg1
Acid ceramidase.
    
 0.919
degs1
Sphingolipid 4-desaturase/C4-monooxygenase.
     
 0.914
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.