STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005015493Zgc:110843. (142 aa)    
Predicted Functional Partners:
ddb1
DNA damage-binding protein 1.
    
 
 0.744
Cisd3
CDGSH iron-sulfur domain-containing protein 3, mitochondrial.
   
  
 0.623
DDA1
DET1- and DDB1-associated protein 1 isoform X2.
    
 
 0.587
LOC104920954
DET1- and DDB1-associated protein 1.
    
 
 0.587
lemd3
Inner nuclear membrane protein Man1.
    
 
 0.472
rbm39
RNA binding motif protein 39.
    
 
 0.472
ENSLCRP00005001144
CDGSH iron-sulfur domain-containing protein 3, mitochondrial.
   
  
 0.470
tomm70
Mitochondrial import receptor subunit TOM70.
      
 0.463
ndufs5
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5.
   
 
 0.401
aasdh
Beta-alanine-activating enzyme isoform X1.
      
 0.400
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.