STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPH1Tryptophan 5-hydroxylase 1 isoform X2. (479 aa)    
Predicted Functional Partners:
LOC104921881
4a-hydroxytetrahydrobiopterin dehydratase.
  
 0.977
PCBD2
Pterin-4-alpha-carbinolamine dehydratase 2 isoform X1.
  
 0.977
ddc
Aromatic-L-amino-acid/L-tryptophan decarboxylase.
   
 0.945
qdpr
Dihydropteridine reductase.
    
 0.941
LOC104920805
Sepiapterin reductase.
   
 
 0.937
spr
Sepiapterin reductase.
   
 
 0.937
LOC104931154
Indoleamine 2,3-dioxygenase 2.
   
 
 0.928
LOC104929405
Indoleamine 2,3-dioxygenase 2 isoform X1.
   
 
 0.928
tdo2
Tryptophan 2,3-dioxygenase isoform X1.
  
 
 0.927
LOC104926568
Dihydrofolate reductase.
     
 0.905
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.