STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104925191FH2 domain-containing protein 1. (807 aa)    
Predicted Functional Partners:
ENSLCRP00005003280
Inverted formin-2-like isoform X2.
 
  
 
 0.897
suox
Sulfite oxidase, mitochondrial.
      
 0.612
LOC104921276
Profilin-2-like.
    
 0.584
LOC104937620
Profilin-1.
    
 0.584
pfn2
Profilin-2 isoform X1.
    
 0.584
LOC104918363
Rho-related GTP-binding protein RhoA-D.
    
 0.505
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.505
LOC104933314
Ras homolog gene family, member A.
    
 0.505
rnd3
Rho-related GTP-binding protein RhoE.
    
 0.505
RND1
Rho-related GTP-binding protein Rho6.
    
 0.505
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.