STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem204Transmembrane protein 204. (221 aa)    
Predicted Functional Partners:
ccdc36
Interactor of HORMAD1 protein 1 isoform X1.
      
 0.515
LOC104925708
Kinesin light chain 1 isoform X1.
      
 0.504
kbtbd12
Kelch repeat and BTB domain-containing protein 12.
   
  
 0.503
tmem178a
Transmembrane protein 178A.
   
  
 0.462
xpc
Xeroderma pigmentosum group C-complementing protein.
      
 0.461
LOC104920629
Fin bud initiation factor.
  
   
 0.459
rrp36
Ribosomal RNA processing protein 36 homolog.
      
 0.408
cfap161
Cilia- and flagella-associated protein 161.
      
 0.408
atr
Serine/threonine-protein kinase ATR.
      
 0.406
LOC104932791
Trafficking protein particle complex subunit 6b.
      
 0.404
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.