STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104932773Transferrin receptor protein 1. (770 aa)    
Predicted Functional Partners:
LOC104918274
Serotransferrin.
  
 0.966
LOC104937014
Transferrin receptor protein 1.
  
  
 
0.903
ENSLCRP00005022555
Major histocompatibility complex class I-related gene protein-like.
    
 0.810
epor
Erythropoietin receptor isoform X2.
    
 0.790
meltf
Melanoma-associated antigen p97.
  
 0.636
LOC109136842
Melanotransferrin.
  
 0.636
ireb2
Iron-responsive element-binding protein 2.
   
 
 0.633
LOC104933413
Otolith matrix protein 1 isoform X1.
  
 0.600
ap2s1
AP-2 complex subunit sigma-1.
     
 0.564
LOC104931226
Hypoxia-inducible factor 1-alpha isoform X1.
   
 0.548
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.