STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem181Transmembrane protein 181. (492 aa)    
Predicted Functional Partners:
toe1
Target of EGR1 protein 1.
      
 0.620
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
      
 0.614
LOC104927920
Sideroflexin-5.
   
  
 0.552
sfxn5
Sideroflexin 5.
   
  
 0.551
nfkbia
NF-kappa-B inhibitor alpha.
    
 
 0.527
LOC109138937
Haptoglobin.
    
 
 0.524
cdc40
Pre-mRNA-processing factor 17.
 
      0.523
LOC109140016
SPARC-related modular calcium-binding protein 1.
      
 0.518
LOC104930521
DNA damage-inducible transcript 4 protein.
      
 0.511
sgms1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
      
 0.501
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.