STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104931186Homeobox and leucine zipper protein Homez. (663 aa)    
Predicted Functional Partners:
LOC104922286
Uncharacterized protein LOC104922286.
  
     0.504
ENSLCRP00005029456
annotation not available
   
 0.501
lrit1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.491
LOC104930427
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.491
LOC104922257
Zinc finger protein 16.
  
 
  0.432
LOC104930568
Alpha-2-HS-glycoprotein.
  
  0.427
LOC104934640
Uncharacterized protein LOC104934640.
  
     0.418
LOC104929745
Zinc finger protein 865.
  
 
  0.416
LOC104920813
Leukemia inhibitory factor receptor.
  
 
  0.404
LOC104919101
Rad and Gem related GTP binding protein 2.
  
 
  0.401
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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