STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdip1Cell death-inducing p53-target protein 1. (200 aa)    
Predicted Functional Partners:
fancm
Fanconi anemia group M protein isoform X1.
    
 0.721
LOC109137506
Ras-related and estrogen-regulated growth inhibitor-like protein.
    
 0.522
mospd1
Motile sperm domain-containing protein 1.
   
 
 0.516
LOC104934027
Ras-related and estrogen-regulated growth inhibitor-like protein.
    
 0.496
LOC104925113
Ras-related and estrogen-regulated growth inhibitor-like protein.
    
 0.496
rerg
Ras-related and estrogen-regulated growth inhibitor.
    
 0.490
LOC104931617
Transforming growth factor-beta receptor-associated protein 1.
      
 0.461
lin52
Protein lin-52 homolog isoform X2.
    
 0.459
LOC104925676
Estrogen receptor gamma.
    
 0.457
dazl
Deleted in azoospermia like.
   
 
 0.454
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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