Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLCRP00005020279 | LOC104920976 | ENSLCRP00005020279 | ENSLCRP00005064469 | annotation not available | Ubiquitin-large subunit ribosomal protein L40e. | 0.526 |
ENSLCRP00005020279 | LOC104935852 | ENSLCRP00005020279 | ENSLCRP00005054821 | annotation not available | Ubiquitin-large subunit ribosomal protein L40e. | 0.526 |
ENSLCRP00005020279 | brca1 | ENSLCRP00005020279 | ENSLCRP00005001876 | annotation not available | Breast cancer type 1 susceptibility protein isoform X1. | 0.537 |
ENSLCRP00005020279 | lonrf1 | ENSLCRP00005020279 | ENSLCRP00005020284 | annotation not available | LON peptidase N-terminal domain and RING finger protein 1. | 0.916 |
ENSLCRP00005020279 | rnf8 | ENSLCRP00005020279 | ENSLCRP00005038464 | annotation not available | E3 ubiquitin-protein ligase RNF8 isoform X1. | 0.555 |
ENSLCRP00005020279 | rps27a | ENSLCRP00005020279 | ENSLCRP00005038547 | annotation not available | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.639 |
ENSLCRP00005020279 | tp53bp1 | ENSLCRP00005020279 | ENSLCRP00005049303 | annotation not available | Tumor suppressor p53-binding protein 1. | 0.593 |
ENSLCRP00005020279 | trip12 | ENSLCRP00005020279 | ENSLCRP00005044842 | annotation not available | E3 ubiquitin-protein ligase TRIP12 isoform X1. | 0.581 |
ENSLCRP00005020279 | ubb | ENSLCRP00005020279 | ENSLCRP00005034668 | annotation not available | Polyubiquitin-B isoform X1. | 0.618 |
ENSLCRP00005020279 | ube2n | ENSLCRP00005020279 | ENSLCRP00005039153 | annotation not available | Ubiquitin-conjugating enzyme E2 N. | 0.524 |
LOC104920976 | ENSLCRP00005020279 | ENSLCRP00005064469 | ENSLCRP00005020279 | Ubiquitin-large subunit ribosomal protein L40e. | annotation not available | 0.526 |
LOC104920976 | LOC104935852 | ENSLCRP00005064469 | ENSLCRP00005054821 | Ubiquitin-large subunit ribosomal protein L40e. | Ubiquitin-large subunit ribosomal protein L40e. | 0.900 |
LOC104920976 | brca1 | ENSLCRP00005064469 | ENSLCRP00005001876 | Ubiquitin-large subunit ribosomal protein L40e. | Breast cancer type 1 susceptibility protein isoform X1. | 0.598 |
LOC104920976 | lonrf1 | ENSLCRP00005064469 | ENSLCRP00005020284 | Ubiquitin-large subunit ribosomal protein L40e. | LON peptidase N-terminal domain and RING finger protein 1. | 0.526 |
LOC104920976 | rnf8 | ENSLCRP00005064469 | ENSLCRP00005038464 | Ubiquitin-large subunit ribosomal protein L40e. | E3 ubiquitin-protein ligase RNF8 isoform X1. | 0.838 |
LOC104920976 | rps27a | ENSLCRP00005064469 | ENSLCRP00005038547 | Ubiquitin-large subunit ribosomal protein L40e. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.999 |
LOC104920976 | tp53bp1 | ENSLCRP00005064469 | ENSLCRP00005049303 | Ubiquitin-large subunit ribosomal protein L40e. | Tumor suppressor p53-binding protein 1. | 0.838 |
LOC104920976 | trip12 | ENSLCRP00005064469 | ENSLCRP00005044842 | Ubiquitin-large subunit ribosomal protein L40e. | E3 ubiquitin-protein ligase TRIP12 isoform X1. | 0.951 |
LOC104920976 | ubb | ENSLCRP00005064469 | ENSLCRP00005034668 | Ubiquitin-large subunit ribosomal protein L40e. | Polyubiquitin-B isoform X1. | 0.964 |
LOC104920976 | ube2n | ENSLCRP00005064469 | ENSLCRP00005039153 | Ubiquitin-large subunit ribosomal protein L40e. | Ubiquitin-conjugating enzyme E2 N. | 0.905 |
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