STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thadaThyroid adenoma-associated protein. (1939 aa)    
Predicted Functional Partners:
ftsj1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
 
 0.936
ftsj3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.697
mrm2
23S rRNA (uridine2552-2'-O)-methyltransferase.
   
 
 0.679
wdr6
WD repeat-containing protein 6.
   
 
 0.670
trmt11
TRNA (guanine(10)-N2)-methyltransferase homolog.
   
  
 0.568
trmt61a
TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A.
   
  
 0.552
wdr4
TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4.
   
  
 0.548
trmt6
TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6.
   
  
 0.527
mettl1
TRNA (guanine-N(7)-)-methyltransferase.
   
  
 0.527
trmt112
Multifunctional methyltransferase subunit TRM112-like protein.
      
 0.450
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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