STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map3k4Mitogen-activated protein kinase kinase kinase 4 isoform X1. (1589 aa)    
Predicted Functional Partners:
GADD45B
Growth arrest and DNA damage-inducible protein GADD45 beta.
    
 0.981
gadd45g
Growth arrest and DNA damage-inducible protein GADD45 gamma.
    
 0.969
MAP2K6
Dual specificity mitogen-activated protein kinase kinase 6.
    
0.954
LOC104928151
Dual specificity mitogen-activated protein kinase kinase 6 isoform X1.
    
0.954
LOC104920946
Growth arrest and DNA damage-inducible protein GADD45 alpha isoform X1.
    
 0.940
GADD45A
Growth arrest and DNA damage-inducible protein GADD45 alpha.
    
 0.940
GADD45B-2
Growth arrest and DNA damage-inducible protein GADD45 beta.
    
 0.940
map2k5
Dual specificity mitogen-activated protein kinase kinase 5.
   
 
0.729
LOC104929670
Dual specificity mitogen-activated protein kinase kinase 2-like isoform X1.
   
 
0.724
map2k1
Dual specificity mitogen-activated protein kinase kinase 1.
   
 
0.724
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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