STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104933395T-cell differentiation antigen CD6 isoform X1. (634 aa)    
Predicted Functional Partners:
LOC104928945
Activated leukocyte cell adhesion molecule.
     
  0.900
alcam
Activated leukocyte cell adhesion molecule.
     
  0.900
LOC104930800
Interleukin-12 receptor subunit beta-2-like isoform X1.
  
 
  0.513
LOC104928278
Uncharacterized protein LOC104928278 isoform X1.
  
 
  0.512
ptpn12
Tyrosine-protein phosphatase non-receptor type 12 isoform X1.
  
  0.462
LOC104936421
Pulmonary surfactant-associated protein D.
   
 0.453
LOC104928096
Sialoadhesin-like.
  
 
  0.449
LOC104927916
Uncharacterized protein LOC104927916.
  
  
  0.420
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.