STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNKCyclin-K isoform X1. (551 aa)    
Predicted Functional Partners:
cdk12
Cyclin-dependent kinase 12/13.
   
 0.974
cdk13
Cyclin-dependent kinase 12/13.
   
 0.974
cdk9
Cyclin-dependent kinase 9.
   
 0.955
polr2a
DNA-directed RNA polymerase II subunit RPB1.
   
 0.920
ccnh
Cyclin H.
     
 0.882
supt5h
Transcription elongation factor SPT5 isoform X1.
    
 0.878
ctdp1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1.
   
 
 0.846
Supt4h1
LOW QUALITY PROTEIN: transcription elongation factor SPT4.
    
 0.830
ccnc
Failed axon connections homolog.
     
0.830
nelfe
Negative elongation factor E.
    
 0.819
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.