STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104927691Catenin (cadherin-associated protein), delta 1. (935 aa)    
Predicted Functional Partners:
rac2
Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2).
    
 0.937
LOC104927171
Ras-related C3 botulinum toxin substrate 3.
    
 0.937
LOC104918805
Ras-related C3 botulinum toxin substrate 1.
    
 0.937
LOC104933314
Ras homolog gene family, member A.
    
 0.930
LOC104932082
Ras homolog gene family, member A.
    
 0.930
LOC104933039
Rho-related GTP-binding protein RhoA-C.
    
 0.930
LOC104918352
Rho-related GTP-binding protein RhoA-B.
    
 0.930
LOC104932543
Cell division control protein 42 homolog.
    
 0.925
LOC104935006
Cell division control protein 42 homolog.
    
 0.925
erbb2
Receptor tyrosine-protein kinase erbB-2 isoform X1.
    
 0.919
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.