STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL19Large subunit ribosomal protein L19e. (197 aa)    
Predicted Functional Partners:
fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.999
eef1g
Elongation factor 1-gamma.
   
 
 0.999
LOC104924229
Large subunit ribosomal protein L26e.
  
 0.996
rpl6
Large subunit ribosomal protein L6e.
  
 0.996
rpl23a
Large subunit ribosomal protein L23Ae.
  
 0.996
rpl9
Large subunit ribosomal protein L9e.
  
 0.996
rpl14
Large subunit ribosomal protein L14e.
  
 0.996
rpl4
60S ribosomal protein L4 isoform X1.
  
 0.996
rpl30
Large subunit ribosomal protein L30e.
   
 0.996
ENSLCRP00005032900
60S ribosomal protein L36a isoform X1.
   
 0.996
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.