STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104940582Nuclear factor erythroid 2-related factor 1/3. (654 aa)    
Predicted Functional Partners:
LOC104918330
Transcription factor MafG isoform X2.
   
 0.783
LOC104930258
Transcription factor MafG isoform X1.
   
 0.783
mafk
Transcription factor MAFF/G/K.
   
 0.734
maff
Transcription factor MAFF/G/K.
   
 0.614
katnal2
Katanin p60 ATPase-containing subunit A-like 2.
   
 
 0.608
CUL3
Cullin 3.
    
 0.601
LOC104924156
Cullin-3 isoform X1.
    
 0.601
cul1
Cullin-1 isoform X1.
    
 0.597
nrf1
Nuclear respiratory factor 1 isoform X1.
    
 
 0.593
LOC104931591
Glycogen synthase kinase-3 beta.
    
 0.581
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.