STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104940584Cytochrome c-a. (114 aa)    
Predicted Functional Partners:
apaf1
Apoptotic protease-activating factor 1 isoform X2.
   
 0.999
LOC104938198
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
 
 0.975
LOC104933823
Apoptosis regulator BAX.
    
 0.973
LOC104924555
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.966
LOC104939823
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
  
 0.951
LOC104927165
Apoptosis regulator BAX isoform X2.
    
 0.951
COX1
Cytochrome c oxidase subunit 1.
  
 0.936
ENSLCRP00005038499
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
  
 0.931
LOC104924589
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.929
casp9
Caspase 9.
   
 0.923
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.