STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgrmc2Membrane-associated progesterone receptor component 2. (199 aa)    
Predicted Functional Partners:
pgr
Progesterone receptor.
      
 0.593
LOC104918709
G-protein coupled estrogen receptor 1.
      
 0.570
LOC104919458
Cytochrome b5.
   
  
 0.551
LOC104935847
Cytochrome b5.
   
  
 0.529
bcap29
B-cell receptor-associated protein 29.
   
 0.486
lman1
Lectin, mannose-binding 1.
    
  0.486
mospd2
Motile sperm domain-containing protein 2.
   
 
  0.486
stx5
Syntaxin 5.
    
  0.486
bcap31
B-cell receptor-associated protein 31.
   
 0.486
tmem214
Transmembrane protein 214.
      
 0.482
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.