STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005022431annotation not available (104 aa)    
Predicted Functional Partners:
kpnb1
Karyopherin subunit beta 1.
    
   0.504
Stn1
CST complex subunit STN1.
    
 0.482
LOC104938517
Uncharacterized protein LOC104938517 precursor.
    
 0.482
ENSLCRP00005013604
Beta-2-microglobulin-like.
    
 0.482
LOC104924892
Replication protein A 32 kDa subunit-like isoform X1.
    
 0.482
rpa2
Replication protein A 32 kDa subunit.
    
 0.482
sass6
SAS-6 centriolar assembly protein.
    
 0.482
LOC104919691
Histone H1.0-B.
   
0.419
dffb
DNA fragmentation factor, 40 kD, beta subunit.
    
 0.418
LOC104923457
Histone H2A.V.
   
 0.417
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.