STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104933146Protein kinase C delta type. (696 aa)    
Predicted Functional Partners:
card11
Caspase recruitment domain-containing protein 11.
   
 0.814
pdpk1
3-phosphoinositide-dependent protein kinase 1 isoform X2.
    
0.757
rac2
Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2).
   
 0.652
LOC104936604
ELAV-like protein 1 isoform X1.
    
 0.625
LOC104939201
ELAV-like protein 1 isoform X1.
    
 0.625
bcl10
B-cell lymphoma/leukemia 10.
    
 0.621
card9
Caspase recruitment domain-containing protein 9 isoform X2.
   
 
 0.616
traf6
TNF receptor-associated factor 6.
    
 0.590
LOC104927313
Guanine nucleotide-binding protein subunit beta-5b-like.
   
 0.569
gnb5
Guanine nucleotide-binding protein subunit beta-5.
   
 0.568
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.